- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.50 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x FDA: DIHYDROFLAVINE-ADENINE DINUCLEOTIDE(Non-covalent)
- 2 x NA: SODIUM ION(Non-functional Binders)
- 2 x GDU: GALACTOSE-URIDINE-5'-DIPHOSPHATE(Non-covalent)
GDU.3: 17 residues within 4Å:- Chain A: A.60, H.64, F.98, F.153, I.154, Y.157, T.158, Q.161, Y.187, F.188, N.278, N.280, R.288, Y.326, Y.364, D.366
- Ligands: FDA.1
17 PLIP interactions:17 interactions with chain A- Hydrophobic interactions: A:F.98
- Hydrogen bonds: A:A.60, A:H.64, A:F.153, A:T.158, A:T.158, A:Q.161, A:Q.161, A:Q.161, A:Y.187, A:N.278, A:N.280, A:R.288, A:R.288, A:Y.326
- Salt bridges: A:R.288
- pi-Stacking: A:Y.157
GDU.10: 17 residues within 4Å:- Chain B: A.60, H.64, F.98, F.153, I.154, Y.157, T.158, Q.161, Y.187, F.188, N.278, N.280, R.288, Y.326, Y.364, D.366
- Ligands: FDA.8
20 PLIP interactions:20 interactions with chain B- Hydrophobic interactions: B:F.98
- Hydrogen bonds: B:A.60, B:H.64, B:F.153, B:Y.157, B:T.158, B:Q.161, B:Q.161, B:Q.161, B:N.278, B:N.280, B:R.288, B:R.288, B:Y.326, B:Y.326, B:Y.364
- Water bridges: B:Y.187, B:Y.187
- Salt bridges: B:R.288
- pi-Stacking: B:Y.157
- 2 x SO4: SULFATE ION(Non-functional Binders)
SO4.4: 3 residues within 4Å:- Chain A: R.176, R.180, N.189
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:N.189
- Salt bridges: A:R.176, A:R.180
SO4.11: 3 residues within 4Å:- Chain B: R.176, R.180, N.189
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:N.189
- Salt bridges: B:R.176, B:R.180
- 6 x IPA: ISOPROPYL ALCOHOL(Non-functional Binders)
IPA.5: 2 residues within 4Å:- Chain A: F.108, F.109
2 PLIP interactions:2 interactions with chain A- Hydrophobic interactions: A:F.109
- Hydrogen bonds: A:F.108
IPA.6: 2 residues within 4Å:- Chain A: N.75, Q.76
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:N.75
IPA.7: 3 residues within 4Å:- Chain A: E.264, F.271, K.312
3 PLIP interactions:3 interactions with chain A- Hydrophobic interactions: A:F.271
- Hydrogen bonds: A:E.264, A:K.312
IPA.12: 2 residues within 4Å:- Chain B: F.108, F.109
2 PLIP interactions:2 interactions with chain B- Hydrophobic interactions: B:F.109
- Hydrogen bonds: B:F.108
IPA.13: 2 residues within 4Å:- Chain B: N.75, Q.76
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:N.75
IPA.14: 3 residues within 4Å:- Chain B: E.264, F.271, K.312
3 PLIP interactions:3 interactions with chain B- Hydrophobic interactions: B:F.271
- Hydrogen bonds: B:E.264, B:K.312
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Wangkanont, K. et al., Substrate recognition by FAD in UDP-galactopyranose mutase. To be published
- Release Date
- 2019-04-17
- Peptides
- UDP-galactopyranose mutase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.50 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x FDA: DIHYDROFLAVINE-ADENINE DINUCLEOTIDE(Non-covalent)
- 2 x NA: SODIUM ION(Non-functional Binders)
- 2 x GDU: GALACTOSE-URIDINE-5'-DIPHOSPHATE(Non-covalent)
- 2 x SO4: SULFATE ION(Non-functional Binders)
- 6 x IPA: ISOPROPYL ALCOHOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Wangkanont, K. et al., Substrate recognition by FAD in UDP-galactopyranose mutase. To be published
- Release Date
- 2019-04-17
- Peptides
- UDP-galactopyranose mutase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A