- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.20 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)
- 2 x NA: SODIUM ION(Non-functional Binders)
- 2 x UD1: URIDINE-DIPHOSPHATE-N-ACETYLGLUCOSAMINE(Non-covalent)
UD1.3: 15 residues within 4Å:- Chain A: F.98, F.153, I.154, Y.157, T.158, Q.161, W.162, Y.187, N.278, N.280, R.288, Y.326, Y.364, D.366
- Ligands: FAD.1
17 PLIP interactions:17 interactions with chain A- Hydrophobic interactions: A:F.98
- Hydrogen bonds: A:F.153, A:T.158, A:T.158, A:Q.161, A:Q.161, A:Y.187, A:N.278, A:N.280, A:D.366
- Water bridges: A:R.288, A:R.288, A:R.288, A:R.288
- Salt bridges: A:R.288, A:R.288
- pi-Stacking: A:Y.157
UD1.10: 15 residues within 4Å:- Chain B: F.98, F.153, I.154, Y.157, T.158, Q.161, W.162, Y.187, N.278, N.280, R.288, Y.326, Y.364, D.366
- Ligands: FAD.8
18 PLIP interactions:18 interactions with chain B- Hydrophobic interactions: B:F.98
- Hydrogen bonds: B:F.153, B:Y.157, B:T.158, B:Q.161, B:Q.161, B:N.278, B:N.280, B:Y.326, B:Y.364, B:D.366
- Water bridges: B:Y.187, B:R.288, B:R.288, B:R.288
- Salt bridges: B:R.288, B:R.288
- pi-Stacking: B:Y.157
- 8 x IPA: ISOPROPYL ALCOHOL(Non-functional Binders)
IPA.4: 2 residues within 4Å:- Chain A: F.108, F.109
No protein-ligand interaction detected (PLIP)IPA.5: 2 residues within 4Å:- Chain A: N.75, Q.76
No protein-ligand interaction detected (PLIP)IPA.6: 3 residues within 4Å:- Chain A: D.260, E.262, Y.314
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:E.262
IPA.7: 2 residues within 4Å:- Chain A: F.271, K.312
4 PLIP interactions:4 interactions with chain A- Hydrophobic interactions: A:F.271, A:F.271
- Hydrogen bonds: A:E.264, A:K.312
IPA.11: 2 residues within 4Å:- Chain B: F.108, F.109
No protein-ligand interaction detected (PLIP)IPA.12: 2 residues within 4Å:- Chain B: N.75, Q.76
No protein-ligand interaction detected (PLIP)IPA.13: 3 residues within 4Å:- Chain B: D.260, E.262, Y.314
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:E.262, B:E.262
IPA.14: 2 residues within 4Å:- Chain B: F.271, K.312
4 PLIP interactions:4 interactions with chain B- Hydrophobic interactions: B:F.271, B:F.271
- Hydrogen bonds: B:E.264, B:K.312
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Wangkanont, K. et al., Substrate recognition by FAD in UDP-galactopyranose mutase. To be published
- Release Date
- 2019-05-15
- Peptides
- UDP-galactopyranose mutase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.20 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)
- 2 x NA: SODIUM ION(Non-functional Binders)
- 2 x UD1: URIDINE-DIPHOSPHATE-N-ACETYLGLUCOSAMINE(Non-covalent)
- 8 x IPA: ISOPROPYL ALCOHOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Wangkanont, K. et al., Substrate recognition by FAD in UDP-galactopyranose mutase. To be published
- Release Date
- 2019-05-15
- Peptides
- UDP-galactopyranose mutase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A