SMTL ID : 6d4e.1

Crystal Structure of a Fc Fragment of Rhesus macaque (Macaca mulatta) IgG1.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

homo-dimer

Ligands

2 x NAG- NAG- BMA- MAN- NAG- MAN- NAG- FUC: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA-MAN-NAG-MAN-NAG-FUC.1: 8 residues within 4Å: Chain A: F.18, F.20, K.23, T.37, V.41, D.42, N.74, R.78 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.78, A:R.78, A:K.23, A:K.23, A:R.78 NAG-NAG-BMA-MAN-NAG-MAN-NAG-FUC.2: 10 residues within 4Å: Chain B: F.18, F.20, K.23, T.37, V.41, D.42, Q.72, N.74, R.78, K.111 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:R.78, B:K.23, B:R.78

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.3: 1 residues within 4Å: Chain A: R.121 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tolbert, W.D. et al., From Rhesus macaque to human: structural evolutionary pathways for immunoglobulin G subclasses. Mabs (2019)

Release Date

2019-05-01

Peptides

Fc Fragment of IgG1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Fc Fragment of IgG1

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