SMTL ID : 6db0.1 (1 other biounit)

N-Terminal bromodomain of Human BRD2 with a Tetrahydroquinoline analogue

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

homo-dimer

Ligands

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 1 residues within 4Å: Chain A: R.38 4 PLIP interactions: 4 interactions with chain A Water bridges: A:R.38, A:R.38, A:R.38 Salt bridges: A:R.38

2 x G3J: 1-[(2S,4R)-4-[(2-chlorophenyl)amino]-2-methyl-6-(1H-pyrazol-3-yl)-3,4-dihydroquinolin-1(2H)-yl]ethan-1-one(Non-covalent)

G3J.2: 11 residues within 4Å: Chain A: W.35, P.36, F.37, Q.39, V.41, K.45, L.46, L.48, Y.93, N.94, I.100 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:W.35, A:F.37, A:V.41, A:L.46, A:L.48, A:Y.93, A:I.100, A:I.100 Hydrogen bonds: A:K.45, A:N.94 pi-Stacking: A:W.35 G3J.3: 9 residues within 4Å: Chain B: W.35, P.36, F.37, V.41, L.46, L.48, N.94, I.100 Ligands: EPE.4 8 PLIP interactions: 8 interactions with chain B Hydrophobic interactions: B:F.37, B:V.41, B:L.46, B:L.48, B:I.100, B:I.100 Hydrogen bonds: B:N.94 pi-Stacking: B:W.35

1 x EPE: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID(Non-functional Binders)

EPE.4: 3 residues within 4Å: Chain B: W.35, R.38 Ligands: G3J.3 2 PLIP interactions: 2 interactions with chain B Water bridges: B:R.38 Salt bridges: B:R.38

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

White, S.W. et al., N-Terminal bromodomain of Human BRD2 with a Tetrahydroquinoline analogue. To Be Published

Release Date

2019-11-13

Peptides

Bromodomain-containing protein 2: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Bromodomain-containing protein 2

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