SMTL ID : 6dgr.1

Crystal Structure of Human PPARgamma Ligand Binding Domain in Complex with CAY10638

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.15 Å

Oligo State

homo-dimer

Ligands

1 x GDY: (5Z)-5-({4-[2-(thiophen-2-yl)ethoxy]phenyl}methylidene)-1,3-thiazolidine-2,4-dione(Non-covalent)

GDY.1: 14 residues within 4Å: Chain A: I.101, F.102, G.104, C.105, Q.106, S.109, H.143, Y.147, L.150, I.161, M.184, H.269, L.273, Y.293 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:S.109, A:Y.293, A:Y.293 pi-Stacking: A:H.269

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Shang, J. et al., Quantitative structural assessment of graded receptor agonism. Proc.Natl.Acad.Sci.USA (2019)

Release Date

2019-05-22

Peptides

Peroxisome proliferator-activated receptor gamma: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Peroxisome proliferator-activated receptor gamma

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