SMTL ID : 6dnj.1

Directed evolutionary changes in Kemp Eliminase KE07 - Crystal 28 round 5

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.65 Å

Oligo State

monomer

Ligands

1 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)

MPD.1: 7 residues within 4Å: Chain A: W.51, G.81, G.82, N.104, Y.129, R.203 Ligands: H5J.2 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:W.51, A:W.51, A:N.104, A:Y.129, A:Y.129 Hydrogen bonds: A:E.102 Water bridges: A:N.104

1 x H5J: 5-nitro-1,2-benzoxazole(Non-covalent)

H5J.2: 9 residues within 4Å: Chain A: W.51, D.52, I.53, G.81, G.82, N.104, Y.129, S.145 Ligands: MPD.1 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:N.104 Water bridges: A:T.105, A:T.105, A:T.105 pi-Stacking: A:Y.129

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hong, N.S. et al., The evolution of multiple active site configurations in a designed enzyme. Nat Commun (2018)

Release Date

2018-08-01

Peptides

Kemp eliminase KE07: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Kemp eliminase KE07

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