SMTL ID : 6do3.2 (1 other biounit)

KLHDC2 ubiquitin ligase in complex with SelK C-end degron

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.16 Å

Oligo State

monomer

Ligands

1 x PRO- PRO- PRO- MET- ALA- GLY- GLY: SelK C-end Degron(Non-covalent)

PRO-PRO-PRO-MET-ALA-GLY-GLY.1: 19 residues within 4Å: Chain A: Y.51, Y.63, S.93, H.110, D.147, K.148, Y.164, R.190, W.192, A.220, A.221, R.237, R.242, S.270, W.271, W.322, L.343, L.344, H.346 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:W.271, A:W.322, A:L.343, A:H.346 Hydrogen bonds: A:K.148, A:R.190, A:R.190, A:R.237, A:S.270 Water bridges: A:D.179 Salt bridges: A:R.237, A:R.242

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Rusnac, D.V. et al., Recognition of the Diglycine C-End Degron by CRL2KLHDC2Ubiquitin Ligase. Mol. Cell (2018)

Release Date

2018-12-19

Peptides

Kelch domain-containing protein 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Kelch domain-containing protein 2

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