SMTL ID : 6do5.2 (1 other biounit)

KLHDC2 ubiquitin ligase in complex with USP1 C-end degron

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

monomer

Ligands

1 x ILE- GLY- LEU- LEU- GLY- GLY: USP1 C-END DEGRON(Non-covalent)

ILE-GLY-LEU-LEU-GLY-GLY.1: 15 residues within 4Å: Chain A: Y.51, H.110, K.148, Y.164, S.182, R.190, W.192, A.220, A.221, R.237, R.242, S.270, W.271, W.322, L.343 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:Y.164, A:L.343 Hydrogen bonds: A:K.148, A:D.179, A:D.179, A:R.190, A:R.190, A:S.270 Water bridges: A:R.237, A:R.237, A:R.237 Salt bridges: A:R.237, A:R.242

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Rusnac, D.V. et al., Recognition of the Diglycine C-End Degron by CRL2KLHDC2Ubiquitin Ligase. Mol. Cell (2018)

Release Date

2018-12-19

Peptides

Kelch domain-containing protein 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Kelch domain-containing protein 2

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