SMTL ID : 6dxk.1

Glucocorticoid Receptor in complex with Compound 11

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.05 Å

Oligo State

homo-dimer

Ligands

2 x HJ4: (8S,11R,13S,14S,17S)-11-[4-(dimethylamino)phenyl]-17-(3,3-dimethylbut-1-yn-1-yl)-17-hydroxy-13-methyl-1,2,6,7,8,11,12,13,14,15,16,17-dodecahydro-3H-cyclopenta[a]phenanthren-3-one (non-preferred name)(Non-covalent)

HJ4.1: 21 residues within 4Å: Chain A: M.41, L.44, N.45, L.47, G.48, G.49, Q.51, W.81, M.82, M.85, L.89, R.92, F.104, M.120, C.124, M.127, L.213, Y.216, C.217, I.242 Chain B: W.38 11 PLIP interactions: 9 interactions with chain A, 2 interactions with chain B Hydrophobic interactions: A:L.47, A:W.81, A:L.89, A:F.104, A:F.104, A:L.213, A:Y.216, B:W.38, B:W.38 Hydrogen bonds: A:Q.51, A:R.92 HJ4.2: 20 residues within 4Å: Chain A: W.38 Chain B: M.41, L.44, N.45, L.47, G.48, Q.51, V.52, M.82, M.85, L.89, R.92, F.104, M.120, M.127, L.213, Y.216, C.217, T.239, I.242 11 PLIP interactions: 9 interactions with chain B, 2 interactions with chain A Hydrophobic interactions: B:L.44, B:L.47, B:L.89, B:F.104, B:F.104, B:L.213, B:Y.216, A:W.38 Hydrogen bonds: B:Q.51, B:R.92, A:W.38

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Rew, Y. et al., Discovery of a Potent and Selective Steroidal Glucocorticoid Receptor Antagonist (ORIC-101). J. Med. Chem. (2018)

Release Date

2018-10-03

Peptides

Glucocorticoid receptor: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Glucocorticoid receptor

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