SMTL ID : 6esn.1

Ligand complex of RORg LBD

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.84 Å

Oligo State

hetero-1-1-mer

Ligands

1 x BWE: (2~{R})-2-acetamido-~{N}-[4-(5-cyano-3-fluoranyl-2-methoxy-phenyl)thiophen-2-yl]-2-(4-ethylsulfonylphenyl)ethanamide(Non-covalent)

BWE.1: 19 residues within 4Å: Chain A: C.43, Q.44, L.45, L.50, C.78, H.81, R.122, M.123, R.125, A.126, V.134, F.135, F.136, E.137, F.146, I.155, I.158, F.159, S.162 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:L.45, A:R.122, A:A.126, A:V.134, A:I.158, A:F.159 Hydrogen bonds: A:F.135, A:E.137, A:S.162 Water bridges: A:Q.44 pi-Stacking: A:F.136

1 x NA: SODIUM ION(Non-functional Binders)

NA.2: 4 residues within 4Å: Chain A: R.54, C.124, Y.127, S.166 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.54, A:S.166 Water bridges: A:A.129

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Narjes, F. et al., Potent and Orally Bioavailable Inverse Agonists of ROR gamma t Resulting from Structure-Based Design. J. Med. Chem. (2018)

Release Date

2018-08-22

Peptides

Nuclear receptor ROR-gamma: A
LYS-HIS-LYS-ILE-LEU-HIS-ARG-LEU-LEU-GLN-ASP-SER: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
C

Nuclear receptor ROR-gamma

LYS-HIS-LYS-ILE-LEU-HIS-ARG-LEU-LEU-GLN-ASP-SER

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