SMTL ID : 6f57.1 (1 other biounit)

Crystal structure of DNMT3A-DNMT3L in complex with single CpG-containing DNA

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.10 Å

Oligo State

hetero-1-1-mer

Ligands

1 x SAH: S-ADENOSYL-L-HOMOCYSTEINE(Non-covalent)

SAH.1: 17 residues within 4Å: Chain A: F.13, D.14, G.15, I.16, T.18, S.36, E.37, V.38, C.39, D.59, V.60, G.80, P.82, L.103, R.264, S.265, W.266 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:F.13, A:I.16, A:T.18, A:V.38, A:D.59, A:D.59, A:V.60, A:W.266 pi-Stacking: A:F.13

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, Z.M. et al., Structural basis for DNMT3A-mediated de novo DNA methylation. Nature (2018)

Release Date

2018-01-31

Peptides

DNA (cytosine-5)-methyltransferase 3A: A
DNA (cytosine-5)-methyltransferase 3-like: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

DNA (cytosine-5)-methyltransferase 3A

DNA (cytosine-5)-methyltransferase 3-like

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