SMTL ID : 6ffh.1

Crystal Structure of mGluR5 in complex with Fenobam at 2.65 A

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.65 Å

Oligo State

monomer

Ligands

5 x OLA: OLEIC ACID(Non-covalent)

OLA.1: 11 residues within 4Å: Chain A: N.332, V.336, L.339, G.340, G.343, L.347, C.377, L.381, V.384, F.388 Ligands: OLA.7 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:V.336, A:V.336, A:L.339, A:L.347, A:V.384, A:V.384, A:F.388 OLA.2: 6 residues within 4Å: Chain A: V.5, I.16, C.23, L.24, L.27 Ligands: OLA.4 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:V.5, A:I.16, A:L.24, A:L.27 OLA.3: 5 residues within 4Å: Chain A: Y.80, I.84, V.304, F.307 Ligands: OLC.8 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:I.84, A:V.304, A:V.304, A:F.307 Hydrogen bonds: A:Y.80 OLA.4: 7 residues within 4Å: Chain A: P.4, V.19, C.23, F.68, I.71, A.72 Ligands: OLA.2 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:V.19 OLA.7: 6 residues within 4Å: Chain A: I.378, L.381, V.384, P.385, G.389 Ligands: OLA.1 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:I.378 Hydrogen bonds: A:P.385

1 x MES: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID(Non-covalent)

MES.5: 6 residues within 4Å: Chain A: Y.325, I.327, N.391, Y.392, K.393, I.394 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:N.391, A:K.393, A:I.394 pi-Cation interactions: A:Y.325

1 x D7W: 1-(3-chlorophenyl)-3-(3-methyl-5-oxidanylidene-4~{H}-imidazol-2-yl)urea(Non-covalent)

D7W.6: 18 residues within 4Å: Chain A: G.59, I.60, G.63, I.86, S.89, P.90, S.93, Y.94, L.339, I.379, W.380, F.383, M.397, S.400, V.401, S.404, A.405, A.408 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:I.60, A:P.90, A:A.405 Hydrogen bonds: A:S.89, A:S.404 pi-Stacking: A:F.383

1 x OLC: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate(Non-covalent)

OLC.8: 4 residues within 4Å: Chain A: Y.80, L.81, I.84 Ligands: OLA.3 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:I.84

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Christopher, J.A. et al., Structure-Based Optimization Strategies for G Protein-Coupled Receptor (GPCR) Allosteric Modulators: A Case Study from Analyses of New Metabotropic Glutamate Receptor 5 (mGlu5) X-ray Structures. J.Med.Chem. (2019)

Release Date

2018-03-07

Peptides

Metabotropic glutamate receptor 5,Endolysin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Membrane

We predict this structure to be a membrane protein.
Show / Hide

Metabotropic glutamate receptor 5,Endolysin

Related Entries With Identical Sequence