SMTL ID : 6fn1.1

Zosuquidar and UIC2 Fab complex of human-mouse chimeric ABCB1 (ABCB1HM)

Coordinates

PDB Format

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-mer

Ligands

3 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)(Non-covalent)

NAG.1: 1 residues within 4Å: Chain A: N.63 No protein-ligand interaction detected (PLIP) NAG.2: 2 residues within 4Å: Chain A: N.60 Chain B: H.98 2 PLIP interactions: 1 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:N.60, B:H.98 NAG.3: 3 residues within 4Å: Chain A: R.64, I.67, N.68 No protein-ligand interaction detected (PLIP)

2 x ZQU: Zosuquidar(Non-covalent)

ZQU.4: 12 residues within 4Å: Chain A: M.38, F.272, Y.279, F.305, L.308, I.309, F.312, Q.694, A.956, Q.959, V.960 Ligands: ZQU.5 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:F.272, A:F.272, A:Q.959, A:V.960 Hydrogen bonds: A:F.952 pi-Stacking: A:F.305 ZQU.5: 16 residues within 4Å: Chain A: L.34, W.201, A.202, F.312, Q.316, E.844, M.845, L.848, Q.915, M.918, Y.919, Y.922, F.952, M.955, Q.959 Ligands: ZQU.4 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:L.34, A:A.202, A:L.848, A:Y.919, A:Q.959 Hydrogen bonds: A:Q.915 Salt bridges: A:E.844, A:E.844 pi-Stacking: A:W.201

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Alam, A. et al., Structure of a zosuquidar and UIC2-bound human-mouse chimeric ABCB1. Proc. Natl. Acad. Sci. U.S.A. (2018)

Release Date

2018-02-21

Peptides

Human-mouse chimeric ABCB1 (ABCBHM): A
UIC2 Antigen Binding Fragment Light chain: B
UIC2 Antigen Binding Fragment Heavy Chain: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

Membrane

We predict this structure to be a membrane protein.
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Human-mouse chimeric ABCB1 (ABCBHM)

UIC2 Antigen Binding Fragment Light chain

UIC2 Antigen Binding Fragment Heavy Chain

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