SMTL ID : 6g92.1

Fragment-based discovery of a highly potent, orally bioavailable inhibitor which modulates the phosphorylation and catalytic activity of ERK1/2

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.99 Å

Oligo State

monomer

Ligands

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: Y.195, R.199, R.202, Y.241 8 PLIP interactions: 8 interactions with chain A Water bridges: A:E.194, A:E.194, A:R.199, A:R.202, A:Y.241, A:Y.241 Salt bridges: A:R.199, A:R.202 SO4.2: 1 residues within 4Å: Chain A: R.199 2 PLIP interactions: 2 interactions with chain A Water bridges: A:R.199 Salt bridges: A:R.199 SO4.3: 1 residues within 4Å: Chain A: K.215 3 PLIP interactions: 3 interactions with chain A Water bridges: A:K.215, A:K.215 Salt bridges: A:K.215

1 x ERZ: ~{N}-(1,5-dimethylpyrazol-4-yl)-5-methyl-pyrimidin-2-amine(Non-covalent)

ERZ.4: 13 residues within 4Å: Chain A: I.39, V.47, A.60, I.92, Q.113, D.114, L.115, M.116, E.117, T.118, D.119, K.122, L.164 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:A.60, A:L.164 Hydrogen bonds: A:M.116, A:M.116

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Heightman, T.D. et al., Fragment-Based Discovery of a Potent, Orally Bioavailable Inhibitor That Modulates the Phosphorylation and Catalytic Activity of ERK1/2. J. Med. Chem. (2018)

Release Date

2018-05-30

Peptides

Mitogen-activated protein kinase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Mitogen-activated protein kinase 1

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