SMTL ID : 6gjy.1

Cyclophilin A complexed with tri-vector ligand 5.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.29 Å

Oligo State

monomer

Ligands

1 x F1Z: ethyl 2-[[(4-aminophenyl)methyl-prop-2-ynyl-carbamoyl]amino]ethanoate(Non-covalent)

F1Z.1: 12 residues within 4Å: Chain A: R.55, F.60, Q.63, G.72, A.101, N.102, A.103, T.107, G.109, Q.111, F.113, H.126 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:F.60, A:A.101, A:F.113 Hydrogen bonds: A:Q.63, A:N.102, A:N.102 Water bridges: A:R.55, A:A.101, A:T.107, A:Q.111, A:Q.111 Salt bridges: A:R.55, A:H.126

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

De Simone, A. et al., A computationally designed binding mode flip leads to a novel class of potent tri-vector cyclophilin inhibitors. Chem Sci (2019)

Release Date

2018-11-07

Peptides

Peptidyl-prolyl cis-trans isomerase A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Peptidyl-prolyl cis-trans isomerase A

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