SMTL ID : 6h3h.1 (1 other biounit)

Fab fragment of antibody against fullerene C60

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.92 Å

Oligo State

hetero-1-1-mer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 6 residues within 4Å: Chain A: K.38, K.63, F.64, K.67, E.89, D.90 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:K.63, A:F.64, A:E.89, A:E.89 Water bridges: A:K.67 GOL.2: 7 residues within 4Å: Chain B: Q.39, K.41, T.47, G.59, V.60, P.61, F.64 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:Q.39, B:Q.39, B:G.59 Water bridges: B:K.41, B:K.41

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.3: 2 residues within 4Å: Chain B: R.23, K.72 2 PLIP interactions: 2 interactions with chain B Salt bridges: B:R.23, B:K.72 SO4.4: 2 residues within 4Å: Chain B: P.61, A.62 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:A.62

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Osipov, E.M. et al., Structure of the Anti-C60 Fullerene Antibody Fab Fragment: Structural Determinants of Fullerene Binding. Acta Naturae (2019)

Release Date

2019-05-15

Peptides

Anti-fullerene antibody Fab fragment Heavy chain: A
Anti-fullerene antibody Fab fragment Light chain: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Anti-fullerene antibody Fab fragment Heavy chain

Anti-fullerene antibody Fab fragment Light chain

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