SMTL ID : 6ha0.1 (1 other biounit)

Unraveling the role of the secretor antigen in human rotavirus attachment to histo-blood group antigens

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.85 Å

Oligo State

monomer

Ligands

1 x NAG- GAL- FUC: alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-GAL-FUC.1: 8 residues within 4Å: Chain A: L.106, Y.108, W.113, T.123, T.124, R.148, E.151, N.155 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:T.124, A:T.124, A:R.148, A:E.151 Water bridges: A:E.151 Salt bridges: A:R.148

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gozalbo-Rovira, R. et al., Unraveling the role of the secretor antigen in human rotavirus attachment to histo-blood group antigens. Plos Pathog. (2019)

Release Date

2019-06-12

Peptides

Outer capsid protein VP4: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Outer capsid protein VP4

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