SMTL ID : 6hdr.1

Human DYRK2 bound to Curcumin

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

monomer

Ligands

1 x CC9: curcumin(Non-covalent)

CC9.1: 18 residues within 4Å: Chain A: K.103, I.105, F.110, A.126, K.128, E.143, I.162, F.178, E.179, L.180, L.181, S.182, L.232, I.244, D.245, F.246, G.247 Ligands: DTD.2 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:I.105, A:A.126, A:I.162, A:F.178, A:I.244, A:I.244 Hydrogen bonds: A:K.103, A:K.128, A:K.128, A:L.181, A:D.245, A:D.245, A:F.246, A:G.247 pi-Stacking: A:F.178

1 x DTD: DITHIANE DIOL(Non-covalent)

DTD.2: 8 residues within 4Å: Chain A: I.105, F.110, V.113, N.184, E.229, N.230, I.244 Ligands: CC9.1 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.184 Water bridges: A:N.184, A:N.184

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.3: 3 residues within 4Å: Chain A: H.6, H.7, H.124 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:H.7 Water bridges: A:K.115 Salt bridges: A:H.6, A:H.7, A:K.115, A:H.124

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Elkins, J.M. et al., DYRK2 bound to Curcumin. To Be Published

Release Date

2019-08-28

Peptides

Dual specificity tyrosine-phosphorylation-regulated kinase 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Dual specificity tyrosine-phosphorylation-regulated kinase 2

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