SMTL ID : 6hoi.2 (1 other biounit)

Structure of Beclin1 LIR motif bound to GABARAPL1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.14 Å

Oligo State

hetero-1-1-mer

Ligands

2 x ACT: ACETATE ION(Non-functional Binders)

ACT.1: 5 residues within 4Å: Chain A: L.50, D.51, K.52, Y.55, R.73 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:L.50 Hydrogen bonds: A:D.51, A:K.52, A:Y.55 Salt bridges: A:R.73 ACT.2: 3 residues within 4Å: Chain A: L.69 Chain B: I.8, G.9 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:G.9

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Birgisdottir, A.B. et al., Members of the autophagy class III phosphatidylinositol 3-kinase complex I interact with GABARAP and GABARAPL1 via LIR motifs. Autophagy (2019)

Release Date

2019-02-27

Peptides

Gamma-aminobutyric acid receptor-associated protein-like 1: A
Beclin-1: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
F

Gamma-aminobutyric acid receptor-associated protein-like 1

Beclin-1

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