SMTL ID : 6hol.2 (1 other biounit)

Structure of ATG14 LIR motif bound to GABARAPL1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.40 Å

Oligo State

hetero-1-1-mer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 5 residues within 4Å: Chain A: Y.11, D.14, H.15, R.53, K.54 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:D.14 Salt bridges: A:H.15, A:R.53, A:K.54 SO4.2: 2 residues within 4Å: Chain A: F.17, R.20 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:F.17 Water bridges: A:K.12, A:R.20 Salt bridges: A:R.20

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 1 residues within 4Å: Chain B: R.14 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:R.14, B:R.14

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Birgisdottir, A.B. et al., Members of the autophagy class III phosphatidylinositol 3-kinase complex I interact with GABARAP and GABARAPL1 via LIR motifs. Autophagy (2019)

Release Date

2019-02-27

Peptides

Gamma-aminobutyric acid receptor-associated protein-like 1: A
Beclin 1-associated autophagy-related key regulator: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
D

Gamma-aminobutyric acid receptor-associated protein-like 1

Beclin 1-associated autophagy-related key regulator

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