SMTL ID : 6i2g.1

ALFA-tag binding nanobody (NbALFA) bound to ALFA-tag peptide.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

hetero-1-1-mer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: R.43, R.65, S.67 Chain B: P.15 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:S.67, A:S.67 Water bridges: A:R.43, A:R.43 Salt bridges: A:R.43, A:R.65 SO4.2: 4 residues within 4Å: Chain A: S.27, G.28, V.29, K.81 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.28, A:V.29 Salt bridges: A:K.81

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gotzke, H. et al., The ALFA-tag is a highly versatile tool for nanobody-based bioscience applications. Nat Commun (2019)

Release Date

2019-09-25

Peptides

ALFA nanobody: A
N7P-SER-ARG-LEU-GLU-GLU-GLU-LEU-ARG-ARG-ARG-LEU-THR-GLU-LPD: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

ALFA nanobody

N7P-SER-ARG-LEU-GLU-GLU-GLU-LEU-ARG-ARG-ARG-LEU-THR-GLU-LPD

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