SMTL ID : 6idr.1

Crystal structure of Vibrio cholerae MATE transporter VcmN in the bent form

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

monomer

Ligands

4 x OLC: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate(Non-covalent)

OLC.1: 8 residues within 4Å: Chain A: R.311, C.314, Q.315, A.362, I.419, G.422, W.423, W.426 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:Q.315, A:A.362, A:W.426, A:W.426 OLC.2: 2 residues within 4Å: Chain A: Y.219, W.221 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:W.221 OLC.3: 8 residues within 4Å: Chain A: R.307, R.311, W.426, Y.429, Q.430, L.433, R.434, N.437 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:R.307, A:R.311, A:W.426, A:W.426, A:Y.429, A:Q.430, A:L.433, A:R.434 OLC.4: 10 residues within 4Å: Chain A: P.247, S.250, S.251, W.269, S.273, E.276, H.352, R.389, L.390, Y.394 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:W.269, A:L.390, A:Y.394

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kusakizako, T. et al., Structural Basis of H+-Dependent Conformational Change in a Bacterial MATE Transporter. Structure (2019)

Release Date

2019-01-16

Peptides

MATE family efflux transporter: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Membrane

We predict this structure to be a membrane protein.
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MATE family efflux transporter

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