SMTL ID : 6ilf.1

CRYSTAL STRUCTURE OF BAT MHC CLASS I PTAL-N*01:01 FOR 2.7 ANGSTROM

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

hetero-1-1-mer

Ligands

1 x ASP- TYR- ILE- ASN- THR- ASN- LEU- VAL- PRO: HEV-2(Non-covalent)

ASP-TYR-ILE-ASN-THR-ASN-LEU-VAL-PRO.1: 28 residues within 4Å: Chain A: Y.7, Y.9, A.24, V.34, R.35, F.36, Y.62, R.65, N.66, N.69, A.70, A.73, T.76, Y.77, V.79, G.80, N.83, Y.87, R.100, Y.102, T.146, W.150, A.153, Y.155, R.158, D.159, Y.162, W.170 34 PLIP interactions: 34 interactions with chain A Hydrophobic interactions: A:Y.7, A:Y.9, A:A.24, A:N.66, A:A.70, A:Y.77, A:V.79, A:Y.102, A:T.146, A:W.150, A:A.153, A:Y.155, A:Y.155, A:Y.162, A:Y.162, A:Y.162 Hydrogen bonds: A:Y.7, A:R.35, A:Y.62, A:N.66, A:N.66, A:N.66, A:N.69, A:N.83, A:R.100, A:Y.102, A:Y.102, A:T.146, A:Y.155, A:Y.155, A:Y.162, A:W.170 Salt bridges: A:R.65, A:K.149

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Qu, Z. et al., Structure and Peptidome of the Bat MHC Class I Molecule Reveal a Novel Mechanism Leading to High-Affinity Peptide Binding. J Immunol. (2019)

Release Date

2019-07-24

Peptides

MHC class I antigen: A
Beta-2-microglobulin: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

MHC class I antigen

Beta-2-microglobulin

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