SMTL ID : 6ili.1 (1 other biounit)

Crystal structure of human MTH1(G2K/D120N mutant) in complex with 8-oxo-dGTP at pH 6.5

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.45 Å

Oligo State

monomer

Ligands

1 x 8DG: 8-OXO-2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE(Non-covalent)

8DG.1: 12 residues within 4Å: Chain A: Y.7, L.9, N.33, G.37, K.38, E.52, F.72, M.81, W.117, D.119, N.120, F.139 20 PLIP interactions: 20 interactions with chain A Hydrophobic interactions: A:W.117 Hydrogen bonds: A:N.33, A:K.38, A:E.52, A:E.56, A:N.120 Water bridges: A:K.38, A:Q.40, A:R.51, A:E.52, A:W.117 Salt bridges: A:K.38, A:K.38, A:K.38, A:D.119 pi-Stacking: A:W.117, A:W.117 pi-Cation interactions: A:F.72, A:W.117, A:W.117

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Waz, S. et al., Structural and Kinetic Studies of the Human Nudix Hydrolase MTH1 Reveal the Mechanism for Its Broad Substrate Specificity. J. Biol. Chem. (2017)

Release Date

2018-11-07

Peptides

7,8-dihydro-8-oxoguanine triphosphatase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

7,8-dihydro-8-oxoguanine triphosphatase

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