SMTL ID : 6j3m.1

Crystal structure of the complex of Phosphopantetheine adenylyltransferase from Acinetobacter baumannii with Pyrophosphate at 2.30A resolution

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

homo-trimer

Ligands

3 x POP: PYROPHOSPHATE 2-(Non-covalent)

POP.1: 7 residues within 4Å: Chain A: G.10, T.11, F.12, H.19, R.89, S.129, S.130 11 PLIP interactions: 11 interactions with chain A Hydrogen bonds: A:T.11, A:F.12, A:R.89, A:S.130, A:S.130 Water bridges: A:D.13, A:S.130, A:T.131, A:T.131 Salt bridges: A:H.19, A:H.19 POP.5: 7 residues within 4Å: Chain B: G.10, T.11, F.12, H.19, R.89, S.129, S.130 11 PLIP interactions: 11 interactions with chain B Hydrogen bonds: B:T.11, B:F.12, B:R.89, B:S.130, B:S.130 Water bridges: B:D.13, B:S.130, B:T.131, B:T.131 Salt bridges: B:H.19, B:H.19 POP.9: 7 residues within 4Å: Chain C: G.10, T.11, F.12, H.19, R.89, S.129, S.130 11 PLIP interactions: 11 interactions with chain C Hydrogen bonds: C:T.11, C:F.12, C:R.89, C:S.130, C:S.130 Water bridges: C:T.11, C:D.13, C:S.129, C:T.131 Salt bridges: C:H.19, C:H.19

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 2 residues within 4Å: Chain A: P.148, Q.149 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Q.149 Water bridges: A:V.147, A:Q.149, A:A.150 SO4.6: 2 residues within 4Å: Chain B: P.148, Q.149 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:Q.149 Water bridges: B:V.147, B:Q.149, B:A.150 SO4.10: 2 residues within 4Å: Chain C: P.148, Q.149 4 PLIP interactions: 4 interactions with chain C Hydrogen bonds: C:Q.149 Water bridges: C:V.147, C:Q.149, C:A.150

6 x CL: CHLORIDE ION(Non-functional Binders)

CL.3: 3 residues within 4Å: Chain A: T.11, T.131, R.134 Ligand excluded by PLIP CL.4: 1 residues within 4Å: Chain A: R.134 Ligand excluded by PLIP CL.7: 3 residues within 4Å: Chain B: T.11, T.131, R.134 Ligand excluded by PLIP CL.8: 1 residues within 4Å: Chain B: R.134 Ligand excluded by PLIP CL.11: 3 residues within 4Å: Chain C: T.11, T.131, R.134 Ligand excluded by PLIP CL.12: 1 residues within 4Å: Chain C: R.134 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Singh, P.K. et al., Crystal structure of the complex of Phosphopantetheine adenylyltransferase from Acinetobacter baumannii with Pyrophosphate at 2.30A resolution. To Be Published

Release Date

2019-01-23

Peptides

Phosphopantetheine adenylyltransferase: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

Phosphopantetheine adenylyltransferase

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