SMTL ID : 6jat.1 (1 other biounit)

Crystal structure of SETD3 bound to Actin peptide and SFG

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.71 Å

Oligo State

hetero-1-1-mer

Ligands

1 x SFG: SINEFUNGIN(Non-covalent)

SFG.1: 18 residues within 4Å: Chain A: R.76, E.104, E.105, F.107, P.181, T.254, R.255, D.276, M.277, C.278, N.279, H.280, Y.314, S.326, G.327, F.328, F.330 Chain B: H.14 11 PLIP interactions: 10 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:F.107, A:N.279, A:H.280, A:H.280, A:Y.314, A:G.327, B:H.14 Salt bridges: A:R.76, A:R.255 pi-Stacking: A:F.328, A:F.328

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 5 residues within 4Å: Chain A: Y.197, K.443, T.444, R.469 Ligands: SO4.3 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:K.443, A:R.469 SO4.3: 3 residues within 4Å: Chain A: R.196, K.443 Ligands: SO4.2 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:R.196, A:K.443 SO4.4: 6 residues within 4Å: Chain A: V.368, F.369, A.370, H.372, S.379, Q.381 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:V.368, A:A.370, A:S.379, A:S.379

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Li, H. et al., Crystal structure of SETD3 bound to Actin peptide and SFG. to be published

Release Date

2020-01-29

Peptides

Histone-lysine N-methyltransferase setd3: A
Actin, gamma-enteric smooth muscle: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Histone-lysine N-methyltransferase setd3

Actin, gamma-enteric smooth muscle

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