SMTL ID : 6jat.2 (1 other biounit)

Crystal structure of SETD3 bound to Actin peptide and SFG

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.71 Å

Oligo State

hetero-1-1-mer

Ligands

1 x SFG: SINEFUNGIN(Non-covalent)

SFG.1: 18 residues within 4Å: Chain A: R.76, E.104, E.105, F.107, P.181, T.254, R.255, D.276, M.277, C.278, N.279, H.280, Y.314, S.326, G.327, F.328, F.330 Chain B: H.14 11 PLIP interactions: 10 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:F.107, A:N.279, A:N.279, A:H.280, A:H.280, A:G.327, B:H.14 Salt bridges: A:R.76, A:R.255 pi-Stacking: A:F.328, A:F.328

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 4 residues within 4Å: Chain A: F.369, A.370, S.379, Q.381 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:V.368, A:A.370, A:S.379, A:S.379, A:L.382 SO4.3: 5 residues within 4Å: Chain A: R.349, L.350, Y.351, A.352, M.353 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.349, A:Y.351, A:A.352, A:M.353

1 x EPE: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID(Non-functional Binders)

EPE.4: 6 residues within 4Å: Chain A: P.44, W.48, Q.199, S.200, I.204, F.208 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:P.44, A:S.200 Salt bridges: A:H.205

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Li, H. et al., Crystal structure of SETD3 bound to Actin peptide and SFG. to be published

Release Date

2020-01-29

Peptides

Histone-lysine N-methyltransferase setd3: A
Actin, gamma-enteric smooth muscle: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

Histone-lysine N-methyltransferase setd3

Actin, gamma-enteric smooth muscle

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