SMTL ID : 6jmr.1

CD98hc extracellular domain bound to HBJ127 Fab and MEM-108 Fab

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-1-1-mer

Ligands

1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 4 residues within 4Å: Chain C: E.316, E.352, N.353, N.382 1 PLIP interactions: 1 interactions with chain C Hydrogen bonds: C:E.316

3 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.2: 1 residues within 4Å: Chain C: N.425 No protein-ligand interaction detected (PLIP) NAG.3: 1 residues within 4Å: Chain C: N.507 No protein-ligand interaction detected (PLIP) NAG.4: 1 residues within 4Å: Chain C: N.366 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lee, Y. et al., Cryo-EM structure of the human L-type amino acid transporter 1 in complex with glycoprotein CD98hc. Nat.Struct.Mol.Biol. (2019)

Release Date

2019-06-19

Peptides

Antibody: A
Antibody: B
4F2 cell-surface antigen heavy chain: C
Antibody: D
Antibody: E

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
E

B
F

C
B

D
C

E
D

Antibody

Antibody

4F2 cell-surface antigen heavy chain

Antibody

Antibody

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