SMTL ID : 6jmy.1

Structure of wild type closed form of peptidoglycan peptidase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.66 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: H.149, D.153, H.230 Ligands: CIT.2 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:H.149, A:D.153, A:D.153, A:H.230

1 x CIT: CITRIC ACID(Non-functional Binders)

CIT.2: 12 residues within 4Å: Chain A: L.82, V.84, R.139, H.149, D.153, H.197, R.223, V.224, S.225, H.228, H.230 Ligands: ZN.1 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:L.82 Hydrogen bonds: A:R.223, A:R.223, A:S.225 Water bridges: A:R.223 Salt bridges: A:R.139, A:R.139, A:H.149, A:H.197, A:H.197, A:R.223, A:H.228, A:H.228, A:H.230

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Min, K. et al., Peptidoglycan reshaping by a noncanonical peptidase for helical cell shape in Campylobacter jejuni. Nat Commun (2020)

Release Date

2020-01-15

Peptides

Peptidase M23: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Peptidase M23

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