SMTL ID : 6jzz.1

The crystal structure of AAR-C294S in complex with ADO.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.01 Å

Oligo State

hetero-1-1-mer

Ligands

1 x ST9: STEAROYL-COENZYME A(Non-covalent)

ST9.1: 36 residues within 4Å: Chain A: G.6, H.7, V.17, M.21, Y.26, W.34, Q.40, V.42, Y.59, E.61, G.99, G.100, I.104, N.131, G.162, T.164, G.165, D.166, I.167, A.188, R.189, N.190, R.193, V.222, A.223, S.224, M.225, G.245, G.246, Y.247, I.278, F.292, S.294, F.295, R.314 Chain B: M.244 26 PLIP interactions: 26 interactions with chain A Hydrophobic interactions: A:W.34, A:Q.40, A:V.42, A:Y.59, A:E.61, A:I.167, A:I.278 Hydrogen bonds: A:H.7, A:Y.59, A:G.100, A:G.100, A:N.131, A:T.164, A:D.166, A:I.167, A:R.189, A:R.189, A:N.190, A:S.224, A:Y.247, A:S.294 Water bridges: A:S.103 Salt bridges: A:R.189, A:R.193, A:R.314, A:R.314

2 x FE2: FE (II) ION(Non-covalent)

FE2.2: 6 residues within 4Å: Chain B: E.55, E.83, H.86, E.167 Ligands: PL3.3, FE2.4 5 PLIP interactions: 5 interactions with chain B Metal complexes: B:E.55, B:E.83, B:E.83, B:H.86, B:E.167 FE2.4: 6 residues within 4Å: Chain B: E.83, E.138, E.167, H.170 Ligands: FE2.2, PL3.3 5 PLIP interactions: 5 interactions with chain B Metal complexes: B:E.83, B:E.138, B:E.167, B:E.167, B:H.170

1 x PL3: HEXADECAN-1-OL(Non-covalent)

PL3.3: 12 residues within 4Å: Chain B: G.54, E.55, A.58, E.83, I.137, E.138, F.140, A.141, Y.145, E.167 Ligands: FE2.2, FE2.4 4 PLIP interactions: 4 interactions with chain B Hydrophobic interactions: B:I.137, B:F.140, B:A.141 Hydrogen bonds: B:E.83

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gao, Y. et al., Structural insights into catalytic mechanism and product delivery of cyanobacterial acyl-acyl carrier protein reductase. Nat Commun (2020)

Release Date

2020-04-01

Peptides

Long-chain acyl-[acyl-carrier-protein] reductase: A
Aldehyde decarbonylase: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Long-chain acyl-[acyl-carrier-protein] reductase

Aldehyde decarbonylase

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