SMTL ID : 6k35.1 (1 other biounit)

Crystal structure of GH20 exo beta-N-acetylglucosaminidase from Vibrio harveyi in complex with NAG-thiazoline

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.36 Å

Oligo State

monomer

Ligands

1 x NGT: 3AR,5R,6S,7R,7AR-5-HYDROXYMETHYL-2-METHYL-5,6,7,7A-TETRAHYDRO-3AH-PYRANO[3,2-D]THIAZOLE-6,7-DIOL(Non-covalent)

NGT.1: 16 residues within 4Å: Chain A: R.274, D.303, H.373, Q.398, D.437, E.438, W.487, W.505, Q.524, Y.530, D.532, M.533, V.544, W.546, W.582, E.584 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:D.437, A:W.487, A:W.505, A:W.582 Hydrogen bonds: A:R.274, A:R.274, A:D.532, A:W.546, A:E.584 Water bridges: A:D.303, A:D.437

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Meekrathok, P. et al., NAG-thiazoline is a potent inhibitor of the Vibrio campbellii GH20 beta-N-Acetylglucosaminidase. Febs J. (2020)

Release Date

2020-05-13

Peptides

Beta-N-acetylglucosaminidase Nag2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Beta-N-acetylglucosaminidase Nag2

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