SMTL ID : 6k9h.1

Human LXR-beta in complex with an agonist

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

homo-dimer

Ligands

2 x D40: ~{tert}-butyl (2'~{S},3~{S})-2-oxidanylidene-2'-phenyl-spiro[1~{H}-indole-3,3'-pyrrolidine]-1'-carboxylate(Non-covalent)

D40.1: 14 residues within 4Å: Chain A: F.65, T.66, A.69, I.103, M.106, L.107, T.110, F.123, F.134, L.139, F.143, I.147, H.229, W.251 16 PLIP interactions: 16 interactions with chain A Hydrophobic interactions: A:F.65, A:F.65, A:F.65, A:A.69, A:I.103, A:L.107, A:F.123, A:F.123, A:F.134, A:L.139, A:F.143, A:I.147, A:W.251 Hydrogen bonds: A:T.110, A:H.229 pi-Stacking: A:F.134 D40.2: 11 residues within 4Å: Chain B: F.65, A.69, I.103, M.106, L.107, T.110, F.134, F.143, I.147, H.229, W.251 13 PLIP interactions: 13 interactions with chain B Hydrophobic interactions: B:F.65, B:F.65, B:F.65, B:A.69, B:I.103, B:L.107, B:F.134, B:F.143, B:I.147, B:I.147, B:W.251 Hydrogen bonds: B:T.110, B:T.110

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chen, H. et al., Discovery of new LXR beta agonists as glioblastoma inhibitors. Eur.J.Med.Chem. (2020)

Release Date

2020-04-22

Peptides

Oxysterols receptor LXR-beta: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Oxysterols receptor LXR-beta

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