- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.25 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x ZN: ZINC ION(Non-covalent)
- 7 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
NAG.2: 4 residues within 4Å:- Chain A: N.132, R.141, Y.142, G.143
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:N.132
NAG.3: 7 residues within 4Å:- Chain A: R.165, N.169
- Chain B: P.71
- Chain C: L.451
- Chain D: L.53, P.54, R.55
7 PLIP interactions:5 interactions with chain A, 2 interactions with chain D- Hydrogen bonds: A:R.165, D:L.53, D:R.55
- Water bridges: A:R.114, A:N.169, A:N.169, A:R.189
NAG.6: 4 residues within 4Å:- Chain B: N.132, R.141, Y.142, E.240
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:N.132
NAG.10: 5 residues within 4Å:- Chain A: F.433
- Chain C: N.132, R.141, Y.142, G.143
1 PLIP interactions:1 interactions with chain C- Hydrogen bonds: C:N.132
NAG.11: 7 residues within 4Å:- Chain A: L.451
- Chain B: L.53, P.54, R.55
- Chain C: R.165, N.169
- Chain D: P.71
4 PLIP interactions:2 interactions with chain C, 2 interactions with chain B- Water bridges: C:N.169, C:R.189
- Hydrogen bonds: B:L.53, B:R.55
NAG.14: 4 residues within 4Å:- Chain D: N.132, R.141, Y.142, G.143
No protein-ligand interaction detected (PLIP)NAG.15: 5 residues within 4Å:- Chain D: E.78, A.164, R.165, F.168, N.169
1 PLIP interactions:1 interactions with chain D- Hydrogen bonds: D:N.169
- 5 x BA: BARIUM ION(Non-functional Binders)(Non-covalent)
BA.4: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)BA.7: 4 residues within 4Å:- Chain B: D.320, D.322, D.324
- Ligands: BA.8
No protein-ligand interaction detected (PLIP)BA.8: 3 residues within 4Å:- Chain B: D.322, D.324
- Ligands: BA.7
1 PLIP interactions:1 interactions with chain B- Metal complexes: B:D.322
BA.12: 1 residues within 4Å:- Chain C: D.324
No protein-ligand interaction detected (PLIP)BA.16: 2 residues within 4Å:- Chain D: D.322, D.324
No protein-ligand interaction detected (PLIP)- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Kuwabara, N. et al., Crystal structures of fukutin-related protein (FKRP), a ribitol-phosphate transferase related to muscular dystrophy. Nat Commun (2020)
- Release Date
- 2020-01-15
- Peptides
- Fukutin-related protein: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.25 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x ZN: ZINC ION(Non-covalent)
- 7 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
- 5 x BA: BARIUM ION(Non-functional Binders)(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Kuwabara, N. et al., Crystal structures of fukutin-related protein (FKRP), a ribitol-phosphate transferase related to muscular dystrophy. Nat Commun (2020)
- Release Date
- 2020-01-15
- Peptides
- Fukutin-related protein: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D