SMTL ID : 6kbz.3 (3 other biounits)

Crystal structure of yedK with ssDNA containing a tetrahydrofuran abasic site

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.65 Å

Oligo State

monomer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 1 residues within 4Å: Chain A: D.139 5 PLIP interactions: 1 interactions with chain A, 4 Ligand-Water interactions Metal complexes: A:D.139, H2O.1, H2O.2, H2O.4, H2O.7

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, N. et al., Molecular basis of abasic site sensing in single-stranded DNA by the SRAP domain of E. coli yedK. Nucleic Acids Res. (2019)

Release Date

2019-07-10

Peptides

SOS response-associated protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
F

SOS response-associated protein

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