- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.11 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x GLY- PRO- LYS- ARG- ARG- GLN: Peptide from Major centromere autoantigen B(Non-covalent)
- 2 x SAH: S-ADENOSYL-L-HOMOCYSTEINE(Non-covalent)
SAH.3: 20 residues within 4Å:- Chain A: Y.37, M.47, G.85, S.86, G.87, R.90, V.91, D.107, M.108, M.109, F.112, Y.133, S.134, L.135, Q.136, Q.151, W.152, V.153, H.156, L.157
9 PLIP interactions:9 interactions with chain A- Hydrogen bonds: A:G.85, A:G.87, A:M.108, A:L.135, A:Q.136
- Water bridges: A:G.89, A:S.134, A:Q.151
- Salt bridges: A:R.90
SAH.6: 20 residues within 4Å:- Chain B: Y.37, M.47, G.85, S.86, G.87, R.90, V.91, D.107, M.108, M.109, F.112, Y.133, S.134, L.135, Q.136, Q.151, W.152, V.153, H.156, L.157
9 PLIP interactions:9 interactions with chain B- Hydrogen bonds: B:G.85, B:M.108, B:L.135, B:Q.136
- Water bridges: B:S.86, B:R.90, B:S.134, B:Q.151
- Salt bridges: B:R.90
- 3 x GOL: GLYCEROL(Non-functional Binders)
GOL.4: 9 residues within 4Å:- Chain A: W.152, V.153, G.155, H.156, D.183, D.196, S.198
- Ligands: GLY-PRO-LYS-ARG-ARG-GLN.1, GLY-PRO-LYS-ARG-ARG-GLN.1
7 PLIP interactions:7 interactions with chain A- Hydrogen bonds: A:G.155, A:D.183, A:S.198
- Water bridges: A:Y.37, A:H.156, A:N.184, A:N.184
GOL.7: 10 residues within 4Å:- Chain B: W.152, V.153, S.154, G.155, H.156, D.183, D.196, S.198
- Ligands: GLY-PRO-LYS-ARG-ARG-GLN-LEU-THR-PHE.2, GLY-PRO-LYS-ARG-ARG-GLN-LEU-THR-PHE.2
5 PLIP interactions:5 interactions with chain B- Hydrogen bonds: B:W.152, B:G.155, B:D.183, B:D.196
- Water bridges: B:D.196
GOL.8: 6 residues within 4Å:- Chain B: L.173, K.174, E.175, N.176, G.177, H.239
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:N.176, B:G.177
- Water bridges: B:R.170, B:L.173
- 3 x CL: CHLORIDE ION(Non-functional Binders)
CL.5: 2 residues within 4Å:- Chain A: R.207, V.217
Ligand excluded by PLIPCL.9: 4 residues within 4Å:- Chain B: A.186, R.187, I.231, P.232
Ligand excluded by PLIPCL.10: 2 residues within 4Å:- Ligands: GLY-PRO-LYS-ARG-ARG-GLN-LEU-THR-PHE.2, GLY-PRO-LYS-ARG-ARG-GLN-LEU-THR-PHE.2
Ligand excluded by PLIP- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Wu, R. et al., Substrate-enzyme engagement regulates state-specific alpha-N methylation of NRMT2. to be published
- Release Date
- 2020-07-08
- Peptides
- Alpha N-terminal protein methyltransferase 1B: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.11 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x GLY- PRO- LYS- ARG- ARG- GLN: Peptide from Major centromere autoantigen B(Non-covalent)
- 2 x SAH: S-ADENOSYL-L-HOMOCYSTEINE(Non-covalent)
- 3 x GOL: GLYCEROL(Non-functional Binders)
- 3 x CL: CHLORIDE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Wu, R. et al., Substrate-enzyme engagement regulates state-specific alpha-N methylation of NRMT2. to be published
- Release Date
- 2020-07-08
- Peptides
- Alpha N-terminal protein methyltransferase 1B: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B