SMTL ID : 6kdz.1 (1 other biounit)

Crystal structure of PDE10A in complex with a triazolopyrimidine inhibitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.10 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: H.85, H.119, D.120, D.230 Ligands: MG.2 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:H.85, A:H.119, A:D.120, A:D.230

1 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 3 residues within 4Å: Chain A: D.120, E.148 Ligands: ZN.1 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:D.120

1 x D79: 4-[2-(5,7-dimethyl-[1,2,4]triazolo[1,5-a]pyrimidin-2-yl)ethyl]-3,7,8,10-tetrazatricyclo[7.4.0.0^{2,7}]trideca-1,3,5,8,10,12-hexaen-6-ol(Non-covalent)

D79.3: 11 residues within 4Å: Chain A: Y.80, L.231, S.233, Y.249, P.268, M.269, E.277, V.278, G.281, Q.282, F.285 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:L.231, A:Y.249, A:V.278, A:F.285, A:F.285 Hydrogen bonds: A:Y.249, A:Q.282 pi-Stacking: A:F.285, A:F.285

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chino, A. et al., Synthesis, SAR study, and biological evaluation of novel 2,3-dihydro-1H-imidazo[1,2-a]benzimidazole derivatives as phosphodiesterase 10A inhibitors. Bioorg.Med.Chem. (2019)

Release Date

2019-08-14

Peptides

cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A

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