SMTL ID : 6khm.3 (12 other biounits)

Lipase (Open form)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

homo-dimer

Ligands

1 x DKF: hexane-1,1-diol(Covalent)

DKF.1: 8 residues within 4Å: Chain A: G.37, L.38, S.114, W.115, F.176, W.192, F.211, H.285 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:L.38, A:F.176, A:F.176, A:W.192, A:F.211 Hydrogen bonds: A:L.38, A:L.38, A:W.115 Salt bridges: A:H.285

1 x DK9: pentane-1,1-diol(Covalent)

DK9.2: 7 residues within 4Å: Chain B: G.37, L.38, S.114, W.115, F.176, W.192, H.285 8 PLIP interactions: 8 interactions with chain B Hydrophobic interactions: B:L.38, B:F.176, B:W.192 Hydrogen bonds: B:L.38, B:W.115 Water bridges: B:L.38, B:H.113 Salt bridges: B:H.285

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kim, H.J. et al., Closed, blocked, and open states of lipase from type II Cutibacterium acnes. To Be Published

Release Date

2020-07-22

Peptides

Hydrolase, alpha/beta domain protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
E

B
F

Hydrolase, alpha/beta domain protein

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