SMTL ID : 6km7.1 (1 other biounit)

The structural basis for the internal interaction in RBBP5

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

hetero-1-1-mer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: R.68, R.110, R.153 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:R.26 Water bridges: A:R.68, A:R.68 Salt bridges: A:R.68, A:R.110, A:R.153, A:K.201 SO4.2: 3 residues within 4Å: Chain A: K.166, R.182, D.228 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:D.228, A:D.228 Water bridges: A:R.182 Salt bridges: A:K.166, A:R.182

1 x 2PE: NONAETHYLENE GLYCOL(Non-covalent)

2PE.3: 4 residues within 4Å: Chain A: R.26, W.27, V.298 Chain B: L.11 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:R.26

1 x PG4: TETRAETHYLENE GLYCOL(Non-functional Binders)

PG4.4: 4 residues within 4Å: Chain B: P.58, L.59, L.60, G.61 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:P.58

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Han, J. et al., The internal interaction in RBBP5 regulates assembly and activity of MLL1 methyltransferase complex. Nucleic Acids Res. (2019)

Release Date

2019-10-02

Peptides

Retinoblastoma-binding protein 5: A
Retinoblastoma-binding protein 5: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
C

Retinoblastoma-binding protein 5

Retinoblastoma-binding protein 5

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