SMTL ID : 6l0x.2 (1 other biounit)

The First Tudor Domain of PHF20L1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.30 Å

Oligo State

monomer

Ligands

3 x CIT: CITRIC ACID(Non-functional Binders)

CIT.1: 2 residues within 4Å: Chain A: E.69, R.70 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.70 Water bridges: A:R.70 Salt bridges: A:R.70 CIT.2: 6 residues within 4Å: Chain A: R.18, P.30, E.48, L.68, E.69, R.70 2 PLIP interactions: 2 interactions with chain A Water bridges: A:E.69 Salt bridges: A:R.18 CIT.3: 6 residues within 4Å: Chain A: H.46, F.47, E.48, R.49, W.50, H.52 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:F.47, A:R.49, A:H.52 Water bridges: A:H.46, A:H.52 Salt bridges: A:H.46, A:H.46, A:H.52

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.4: 3 residues within 4Å: Chain A: A.17, R.18, R.70 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:R.18 Water bridges: A:G.10, A:G.10, A:R.18, A:R.18, A:R.18, A:R.70 GOL.5: 4 residues within 4Å: Chain A: D.37, E.40, K.42, W.57 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:D.37, A:D.37, A:E.40 Water bridges: A:D.37, A:D.37

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lv, M. et al., Conformational Selection in Ligand Recognition by the First Tudor Domain of PHF20L1. J Phys Chem Lett (2020)

Release Date

2020-09-23

Peptides

PHD finger protein 20-like protein 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

PHD finger protein 20-like protein 1

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