SMTL ID : 6lk1.2 (1 other biounit)

Ultrahigh resolution X-ray structure of Ferredoxin I from C. reinhardtii

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 0.90 Å

Oligo State

monomer

Ligands

1 x FES: FE2/S2 (INORGANIC) CLUSTER(Non-covalent)

FES.1: 10 residues within 4Å: Chain A: Y.36, S.37, C.38, R.39, G.41, A.42, C.43, C.46, L.74, C.76 4 PLIP interactions: 4 interactions with chain A, Metal complexes: A:C.38, A:C.43, A:C.46, A:C.76

4 x BEN: BENZAMIDINE(Non-functional Binders)

BEN.2: 3 residues within 4Å: Chain A: N.70, F.72, A.93 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:F.72 BEN.3: 3 residues within 4Å: Chain A: S.37, C.38, A.40 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:C.38 BEN.4: 4 residues within 4Å: Chain A: D.25, E.28, E.29, R.39 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:E.28, A:E.29 Hydrogen bonds: A:D.25, A:E.28, A:R.39 BEN.5: 3 residues within 4Å: Chain A: P.9, S.10, G.11 1 PLIP interactions: 1 interactions with chain A Water bridges: A:S.10

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ohnishi, Y. et al., X-ray dose-dependent structural changes of the [2Fe-2S] ferredoxin from Chlamydomonas reinhardtii. J.Biochem. (2020)

Release Date

2020-05-27

Peptides

Ferredoxin, chloroplastic: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Ferredoxin, chloroplastic

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