SMTL ID : 6lz2.1 (1 other biounit)

Crystal structure of a thermostable green fluorescent protein (TGP) with a synthetic nanobody (Sb44)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.03 Å

Oligo State

hetero-1-1-mer

Ligands

2 x NA: SODIUM ION(Non-functional Binders)

NA.1: 4 residues within 4Å: Chain A: D.56, L.136, K.137, I.196 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:D.56 Water bridges: A:I.196 NA.2: 4 residues within 4Å: Chain A: D.56, T.59, W.138, I.196 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:D.56, A:D.56, A:T.59 Water bridges: A:W.138, A:I.196

1 x ACT: ACETATE ION(Non-functional Binders)

ACT.3: 1 residues within 4Å: Chain B: Y.58 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cai, H. et al., An improved fluorescent tag and its nanobodies for membrane protein expression, stability assay, and purification. Commun Biol (2020)

Release Date

2020-12-23

Peptides

Thermostable green fluorescent protein: A
synthetic nanobody (sybody) 44 against the thermostable green fluorescent protein (TGP): B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Thermostable green fluorescent protein

synthetic nanobody (sybody) 44 against the thermostable green fluorescent protein (TGP)

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