SMTL ID : 6ms1.2 (1 other biounit)

Crystal structure of the human Scribble PDZ1 domain bound to the PDZ-binding motif of APC

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.35 Å

Oligo State

monomer

Ligands

1 x GLY- SER- TYR- LEU- VAL- THR- SER- VAL: APC C-terminus peptide(Non-covalent)

GLY-SER-TYR-LEU-VAL-THR-SER-VAL.1: 18 residues within 4Å: Chain A: G.16, L.17, G.18, I.19, S.20, I.21, A.22, G.23, G.26, S.27, T.28, P.29, Y.30, S.40, R.41, H.72, V.76, L.79 18 PLIP interactions: 18 interactions with chain A Hydrophobic interactions: A:I.19, A:A.22, A:H.72, A:V.76, A:L.79 Hydrogen bonds: A:L.17, A:G.18, A:I.19, A:I.19, A:I.21, A:I.21, A:G.23, A:T.28, A:R.41, A:H.72 Water bridges: A:S.20, A:G.23, A:G.26

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 6 residues within 4Å: Chain A: G.16, G.18, R.41, S.43, G.46, P.47 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:G.16, A:S.43, A:S.43 Water bridges: A:R.41

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

How, J.Y. et al., Crystal structure of the human Scribble PDZ1 domain bound to the PDZ-binding motif of APC. FEBS Lett. (2019)

Release Date

2019-02-06

Peptides

Protein scribble homolog: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Protein scribble homolog

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