SMTL ID : 6n4y.2 (3 other biounits)

Metabotropic Glutamate Receptor 5 Extracellular Domain with Nb43

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.26 Å

Oligo State

hetero-1-1-mer

Ligands

1 x NAG- NAG- BMA- MAN- MAN- FUC- FUC: alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-3)][alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA-MAN-MAN-FUC-FUC.1: 3 residues within 4Å: Chain A: N.462, F.463, T.464 No protein-ligand interaction detected (PLIP)

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.2: 2 residues within 4Å: Chain A: N.399, S.401 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.401, A:S.401

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Koehl, A. et al., Structural insights into the activation of metabotropic glutamate receptors. Nature (2019)

Release Date

2019-01-23

Peptides

Metabotropic glutamate receptor 5: A
Nanobody 43: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
E

Metabotropic glutamate receptor 5

Nanobody 43

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