SMTL ID : 8tao.1

Quis and CDPPB bound active mGlu5

Coordinates

PDB Format

Method

ELECTRON MICROSCOPY

Oligo State

hetero-2-2-mer

Ligands

2 x QUS: (S)-2-AMINO-3-(3,5-DIOXO-[1,2,4]OXADIAZOLIDIN-2-YL)-PROPIONIC ACID(Non-covalent)

QUS.1: 15 residues within 4Å: Chain A: Y.69, W.105, G.155, S.156, S.157, S.178, A.179, T.180, Y.228, E.284, G.285, D.310, G.311, R.315, K.401 10 PLIP interactions: 10 interactions with chain A Hydrogen bonds: A:Y.69, A:Y.69, A:S.157, A:T.180, A:T.180, A:G.285, A:D.310, A:R.315, A:K.401 pi-Stacking: A:W.105 QUS.3: 15 residues within 4Å: Chain B: Y.69, W.105, G.155, S.156, S.157, S.178, A.179, T.180, Y.228, E.284, G.285, D.310, G.311, R.315, K.401 11 PLIP interactions: 11 interactions with chain B Hydrogen bonds: B:Y.69, B:Y.69, B:S.157, B:S.178, B:S.178, B:T.180, B:G.285, B:D.310, B:R.315, B:K.401 pi-Stacking: B:W.105

1 x YKU: 3-cyano-N-(1,3-diphenyl-1H-pyrazol-5-yl)benzamide(Non-covalent)

YKU.2: 12 residues within 4Å: Chain B: S.659, P.660, Y.664, L.749, N.752, I.756, T.786, W.790, S.810, V.811, S.814, A.815 11 PLIP interactions: 11 interactions with chain B Hydrophobic interactions: B:P.660, B:Y.664, B:L.749, B:T.786, B:W.790, B:V.811, B:V.811, B:A.815 Hydrogen bonds: B:N.752, B:S.814 pi-Stacking: B:W.790

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kumar, K.K. et al., Step-wise activation of a Family C GPCR. Biorxiv (2023)

Release Date

2023-10-11

Peptides

Metabotropic glutamate receptor 5: AB
Nb43: CD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Membrane

We predict this structure to be a membrane protein.
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Metabotropic glutamate receptor 5

Nb43

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