- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.60 Å
- Oligo State
- hetero-2-2-2-mer
- Ligands
- 4 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)
- 2 x SMA: STIGMATELLIN A(Non-covalent)
SMA.3: 29 residues within 4Å:- Chain A: L.137, M.140, A.141, F.144, M.145, Y.147, M.154, G.158, V.161, I.162, T.163, L.165, F.166, L.180, F.194, L.197, I.292, V.293, P.294, E.295, F.298, F.301, Y.302, L.305, M.336, F.337, I.340
- Chain F: C.151, H.152
13 PLIP interactions:13 interactions with chain A- Hydrophobic interactions: A:F.144, A:F.144, A:F.144, A:V.161, A:I.162, A:L.180, A:F.194, A:L.197, A:P.294, A:F.298, A:F.301, A:Y.302
- Hydrogen bonds: A:E.295
SMA.10: 30 residues within 4Å:- Chain C: L.132, C.151, H.152
- Chain D: L.137, M.140, A.141, F.144, M.145, Y.147, M.154, G.158, V.161, I.162, T.163, L.165, F.166, L.180, F.194, L.197, I.292, V.293, P.294, E.295, F.298, F.301, Y.302, L.305, M.336, F.337, I.340
13 PLIP interactions:13 interactions with chain D- Hydrophobic interactions: D:F.144, D:F.144, D:F.144, D:V.161, D:I.162, D:L.180, D:F.194, D:L.197, D:F.298, D:F.298, D:F.301, D:Y.302
- Hydrogen bonds: D:E.295
- 2 x HEC: HEME C(Covalent)
HEC.4: 26 residues within 4Å:- Chain B: V.31, V.35, C.36, A.38, C.39, H.40, L.94, N.96, A.97, P.98, L.100, M.103, R.107, Y.130, I.131, V.134, L.135, F.160, I.183, A.184, M.185, P.186, P.188, L.189, V.211, L.215
13 PLIP interactions:13 interactions with chain B,- Hydrophobic interactions: B:V.35, B:P.98, B:I.131, B:L.135, B:I.183, B:P.188, B:L.189, B:L.215
- Hydrogen bonds: B:Y.130, B:Y.130, B:A.184
- Salt bridges: B:R.107
- Metal complexes: B:H.40
HEC.11: 27 residues within 4Å:- Chain E: V.31, V.35, C.36, A.38, C.39, H.40, L.94, N.96, A.97, P.98, L.100, M.103, R.107, Y.130, I.131, V.134, L.135, F.160, N.162, I.183, A.184, M.185, P.186, P.188, L.189, V.211, L.215
14 PLIP interactions:14 interactions with chain E,- Hydrophobic interactions: E:L.94, E:I.131, E:L.135, E:I.183, E:M.185, E:P.186, E:P.188, E:L.189, E:L.215
- Hydrogen bonds: E:Y.130, E:Y.130, E:A.184
- Salt bridges: E:R.107
- Metal complexes: E:H.40
- 2 x SR: STRONTIUM ION(Non-functional Binders)
SR.5: 5 residues within 4Å:- Chain B: D.8, V.9, P.10, E.14, E.129
5 PLIP interactions:5 interactions with chain B- Metal complexes: B:D.8, B:V.9, B:E.14, B:E.14, B:E.129
SR.13: 5 residues within 4Å:- Chain E: D.8, V.9, P.10, E.14, E.129
5 PLIP interactions:5 interactions with chain E- Metal complexes: E:D.8, E:V.9, E:E.14, E:E.14, E:E.129
- 2 x BOG: octyl beta-D-glucopyranoside(Non-covalent)
BOG.6: 16 residues within 4Å:- Chain A: L.261, V.262, A.265, I.266, F.269, M.270
- Chain B: F.13, E.14, G.15, P.16, F.122, N.123, G.124, R.226, K.227, V.234
5 PLIP interactions:3 interactions with chain B, 2 interactions with chain A- Hydrogen bonds: B:G.15, B:F.122, B:K.227
- Hydrophobic interactions: A:A.265, A:F.269
BOG.12: 15 residues within 4Å:- Chain D: V.262, A.265, I.266, F.269, M.270
- Chain E: F.13, E.14, G.15, P.16, Q.120, L.121, F.122, N.123, G.124, K.227
5 PLIP interactions:4 interactions with chain E, 1 interactions with chain D- Hydrogen bonds: E:G.15, E:G.15, E:L.121, E:K.227
- Hydrophobic interactions: D:A.265
- 2 x FES: FE2/S2 (INORGANIC) CLUSTER(Non-covalent)
FES.7: 12 residues within 4Å:- Chain C: C.129, H.131, L.132, G.133, C.134, C.149, C.151, H.152, G.153, S.154, P.166
- Chain D: V.161
4 PLIP interactions:4 interactions with chain C,- Metal complexes: C:C.129, C:H.131, C:C.149, C:H.152
FES.14: 12 residues within 4Å:- Chain A: V.161
- Chain F: C.129, H.131, L.132, G.133, C.134, C.149, C.151, H.152, G.153, S.154, P.166
4 PLIP interactions:4 interactions with chain F,- Metal complexes: F:C.129, F:H.131, F:C.149, F:H.152
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Esser, L. et al., Crystal structure of bacterial cytochromebc1in complex with azoxystrobin reveals a conformational switch of the Rieske iron-sulfur protein subunit. J.Biol.Chem. (2019)
- Release Date
- 2019-06-19
- Peptides
- Cytochrome b: AD
Cytochrome c1: BE
Ubiquinol-cytochrome c reductase iron-sulfur subunit: CF - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
KD
OB
LE
PC
MF
Q - Membrane
-
We predict this structure to be a membrane protein.
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.60 Å
- Oligo State
- hetero-2-2-2-mer
- Ligands
- 4 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)
- 2 x SMA: STIGMATELLIN A(Non-covalent)
- 2 x HEC: HEME C(Covalent)
- 2 x SR: STRONTIUM ION(Non-functional Binders)
- 2 x BOG: octyl beta-D-glucopyranoside(Non-covalent)
- 2 x FES: FE2/S2 (INORGANIC) CLUSTER(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Esser, L. et al., Crystal structure of bacterial cytochromebc1in complex with azoxystrobin reveals a conformational switch of the Rieske iron-sulfur protein subunit. J.Biol.Chem. (2019)
- Release Date
- 2019-06-19
- Peptides
- Cytochrome b: AD
Cytochrome c1: BE
Ubiquinol-cytochrome c reductase iron-sulfur subunit: CF - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
KD
OB
LE
PC
MF
Q - Membrane
-
We predict this structure to be a membrane protein.