SMTL ID : 6noj.1

PD-L1 IgV domain V76T with fragment

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.33 Å

Oligo State

homo-dimer

Ligands

1 x KW7: methyl 3-amino-4-(2-fluorophenyl)-1H-pyrrole-2-carboxylate(Non-covalent)

KW7.1: 15 residues within 4Å: Chain A: Y.39, M.98, I.99, S.100, A.104, D.105, Y.106 Chain B: I.37, Y.39, Q.49, M.98, I.99, S.100, A.104, D.105 7 PLIP interactions: 4 interactions with chain A, 3 interactions with chain B Hydrophobic interactions: A:M.98, A:A.104, B:M.98, B:A.104 Hydrogen bonds: A:D.105, B:M.98 pi-Stacking: A:Y.39

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Perry, E. et al., Fragment-based screening of programmed death ligand 1 (PD-L1). Bioorg. Med. Chem. Lett. (2019)

Release Date

2019-02-20

Peptides

Programmed cell death 1 ligand 1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Programmed cell death 1 ligand 1

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