SMTL ID : 6o2x.1 (1 other biounit)

Structure of cruzain bound to MMTS inhibitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.19 Å

Oligo State

monomer

Ligands

4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 4 residues within 4Å: Chain A: V.5, D.6, W.7, A.9 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:D.6 EDO.2: 6 residues within 4Å: Chain A: Q.37, L.40, A.41, A.212, V.213, V.214 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:A.212, A:V.214 EDO.3: 3 residues within 4Å: Chain A: H.115, V.116, E.117 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:E.117 EDO.4: 7 residues within 4Å: Chain A: D.18, Q.19, G.20, Q.21, S.183, W.184, T.185 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:D.18, A:G.20 Water bridges: A:Q.19, A:G.20

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.5: 5 residues within 4Å: Chain A: R.8, N.170, Y.177, I.179, R.195 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Y.177 Water bridges: A:D.6, A:R.8

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Barbosa da Silva, E. et al., Cruzain structures: apocruzain and cruzain bound to S-methyl thiomethanesulfonate and implications for drug design. Acta Crystallogr.,Sect.F (2019)

Release Date

2019-05-29

Peptides

Cruzipain: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Cruzipain

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