SMTL ID : 6ux6.1

Cruzain covalently bound by a vinylsulfone compound

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.94 Å

Oligo State

monomer

Ligands

1 x TM8: Nalpha-[(benzyloxy)carbonyl]-N-[(2S)-1-phenyl-4-(phenylsulfonyl)butan-2-yl]-L-phenylalaninamide(Covalent)

TM8.1: 21 residues within 4Å: Chain A: Q.19, G.23, C.25, W.26, T.59, D.60, S.61, S.64, G.65, G.66, L.67, M.68, N.70, A.138, A.141, L.160, D.161, H.162, W.184, E.208 Ligands: GOL.2 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:L.67, A:L.67, A:A.138, A:A.141, A:L.160, A:H.162 Hydrogen bonds: A:G.66, A:G.66, A:D.161 pi-Stacking: A:H.162, A:W.184

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 4 residues within 4Å: Chain A: G.20, M.145, W.184 Ligands: TM8.1 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Q.19, A:G.20

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhai, X. et al., Cruzain covalently bound by a vinylsulfone compound. To Be Published

Release Date

2020-11-25

Peptides

Cruzipain: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Cruzipain

Related Entries With Identical Sequence