SMTL ID : 6o5z.2 (1 other biounit)

Crystal Structure of the human MLKL pseudokinase domain bound to compound 2

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.29 Å

Oligo State

monomer

Ligands

1 x LN4: 1-[2-fluoranyl-5-(trifluoromethyl)phenyl]-3-[4-[methyl-[2-[(3-sulfamoylphenyl)amino]pyrimidin-4-yl]amino]phenyl]urea(Non-covalent)

LN4.1: 22 residues within 4Å: Chain A: L.25, R.26, L.33, A.44, K.46, E.66, T.69, M.70, L.79, M.99, E.100, Y.101, C.102, G.105, E.109, L.136, H.145, L.154, L.163, A.164, G.165, F.166 18 PLIP interactions: 18 interactions with chain A Hydrophobic interactions: A:L.33, A:A.44, A:K.46, A:T.69, A:L.79, A:Y.101, A:A.164, A:F.166 Hydrogen bonds: A:R.26, A:E.66, A:E.66, A:E.66, A:C.102, A:C.102, A:E.109, A:G.165 pi-Stacking: A:F.166 Halogen bonds: A:L.163

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 9 residues within 4Å: Chain A: P.195, Y.212, V.240, R.244, Q.245, Q.246, R.265, A.266, H.267 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:V.240, A:Q.246 Water bridges: A:H.267

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pierotti, C.L. et al., Potent Inhibition of Necroptosis by Simultaneously Targeting Multiple Effectors of the Pathway. Acs Chem.Biol. (2020)

Release Date

2020-09-16

Peptides

Mixed lineage kinase domain-like protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Mixed lineage kinase domain-like protein

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