SMTL ID : 7mon.1

Structure of human RIPK3-MLKL complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.23 Å

Oligo State

hetero-1-1-mer

Ligands

2 x ZL1: N-[4-({2-[(cyclopropanecarbonyl)amino]pyridin-4-yl}oxy)-3-fluorophenyl]-1-(4-fluorophenyl)-2-oxo-1,2-dihydropyridine-3-carboxamide(Non-covalent)

ZL1.1: 15 residues within 4Å: Chain A: R.26, N.28, L.33, A.44, M.99, E.100, Y.101, C.102, E.103, G.105, T.106, E.109, L.154, D.185, R.186 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:R.26, A:L.33, A:A.44, A:L.154, A:L.154 Hydrogen bonds: A:R.26, A:R.26, A:C.102, A:C.102 pi-Cation interactions: A:K.46 ZL1.2: 20 residues within 4Å: Chain B: V.27, V.35, A.48, K.50, V.52, S.54, I.57, E.60, M.64, L.73, L.92, T.94, K.95, F.96, M.97, G.100, L.149, A.159, D.160, F.161 13 PLIP interactions: 13 interactions with chain B Hydrophobic interactions: B:V.27, B:K.50, B:V.52, B:E.60, B:L.92, B:F.96, B:L.149 Hydrogen bonds: B:K.50, B:K.50, B:M.97, B:M.97, B:D.160 pi-Stacking: B:F.161

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Meng, Y. et al., Human RIPK3 maintains MLKL in an inactive conformation prior to cell death by necroptosis. Nat Commun (2021)

Release Date

2021-11-17

Peptides

Mixed lineage kinase domain-like protein: A
Receptor-interacting serine/threonine-protein kinase 3: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Mixed lineage kinase domain-like protein

Receptor-interacting serine/threonine-protein kinase 3

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